Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911034.1_cds_XP_016461086.1_54441
CDS Infomation

[gene=LOC107784466] [db_xref=GeneID:107784466] [protein=serine/threonine-protein kinase SRPK-like] [protein_id=XP_016461086.1] [location=join(10480..10716,12021..12911,21627..21674,21764..22159)] [gbkey=CDS]
Sequence

ATGGAGGGGAGTAATCAAGATCAGCAGCTGAACGCGGCGGTGGCGGAGGAGGAGGAAGTG
GAGGAGAGTAGTGATGATTGTACTTCGGAAGATGAAGGGACTGATGATTACAGGAGGGGA
GGTTACCATGCCGTTCGAATAGGGGATAGTTTCAAAGGAGGTCGGTATGTTGTTCAAAGG
AAACTTGGTTGGGGTCACTTCTCTACTGTTTGGTTGGCTTGGGATTCTCTCATGTCCCAA
TTTGTAGCATTGAAAGTACAAAAGAGTGCGCAGCATTACACGGAGGCAGCAATGGATGAG
ATCACTATTCTAAAGCAGATTGCGGAATGTGATCTGGATGATAAAAAATGTGTTGTGAAG
TTATTGGATCATTTTAAGCACTCAGGTCCAAATGGGCAACATGTGTGTATGGTTTTTGAG
TATTTGGGTGACAATCTCTTGACACTTCTTAAGTATACTGATTATCACGGGCTGCCTATT
CATATGGTTAAAGAGCTCTGTTATCATGTTTTAGTCGGATTGGATTATTTGCATCGACAG
CTATCTATCATACACACTGATTTGAAACCAGAGAATGTACTGCTCTGTTCCACAATTGAC
CCGTCTAAGGATCCCAGAAAATCTGGAAAACCTCTTATACTTCCTAATCACAAGGATAAG
ACCACGCTGGAGTCGGGGGCTCTTAATGGTTATGTAACGTCAAATGGAAATTTGACTAAG
AACCATAGTAAGAAGATTAGAAGAAAGGCCAAACAAGCAGCTCAATGTTATGTGGATGAT
CAGCTTGATTCTTCTATAAATGTTAATATATTGTCAAATGCTGATGCTGCAACAGCCAGT
GGGAAAGAATGCGAGGGTCCTAAGAGAGGAAGCCGTTCGACGAGGAGGAAGCTGTTAGAG
GGTGTTGACCTGAAGTGCAAAGTGGTTGACTTTGGGAGTGCTTGTTGGACATACAAACAG
TTTACAAATGATATTCAAACTAGACAGTACAGGTGTCCTGAAGTCATCCTCGGATCTAAA
TATTCAACCTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGT
GACGTGTTATTTGATCCTCACAGTGGTGACAACTTTGACAGAGATGAGGACCACTTAGCA
CTAATGATGGAGCTTCTAGGAATGATGCCACGGAAAATTGCCTTGGGTGGTCGTTATTCA
CGTGAGTTGTTCAATAGACATGGTGATTTGAGGCACATCAGACGGTTGCGCTTTTGGCCC
TTGAAAAAGGTTCTGATAGAGAAGTATGAATTCAGTGAGCAAGACGCAAAGGACATGGCT
GATTTCCTGGTCCCGATACTTGATTTTGTCCCAGAGAAACGGCCTACTGCAGCTCAGTGC
CTTCTTCATCCGTGGATCAACGCTGGTCCACACTTGTTAGAACCTTCCTTGCCCGATACA
CAATCTAAAGCTATGGAGATTGTCCAAACCAAGAAACAGAATTTAGAAACGGAGGCAATG
GAGGTCGGAATGGGGAAAATGGCTATCAACAAGGACATGAGAAGTTTCAGAAGTTACTCA
GTCAAATTCTGA

Peptide Sequence

PEP ID

XP_016461086.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase SRPK-like [Nicotiana tabacum]
Sequence

MEGSNQDQQLNAAVAEEEEVEESSDDCTSEDEGTDDYRRGGYHAVRIGDSFKGGRYVVQR
KLGWGHFSTVWLAWDSLMSQFVALKVQKSAQHYTEAAMDEITILKQIAECDLDDKKCVVK
LLDHFKHSGPNGQHVCMVFEYLGDNLLTLLKYTDYHGLPIHMVKELCYHVLVGLDYLHRQ
LSIIHTDLKPENVLLCSTIDPSKDPRKSGKPLILPNHKDKTTLESGALNGYVTSNGNLTK
NHSKKIRRKAKQAAQCYVDDQLDSSINVNILSNADAATASGKECEGPKRGSRSTRRKLLE
GVDLKCKVVDFGSACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATG
DVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRELFNRHGDLRHIRRLRFWP
LKKVLIEKYEFSEQDAKDMADFLVPILDFVPEKRPTAAQCLLHPWINAGPHLLEPSLPDT
QSKAMEIVQTKKQNLETEAMEVGMGKMAINKDMRSFRSYSVKF

Transcript Sequence

Gene sequence data has not been registered.